Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928733.1_cds_XP_016476249.1_68099
CDS Infomation

[gene=LOC107797840] [db_xref=GeneID:107797840] [protein=glutamate decarboxylase] [protein_id=XP_016476249.1] [location=join(3464..3757,4388..4588,4930..5398,5514..5566,5922..6413)] [gbkey=CDS]
Sequence

ATGGTAGTAACAACGACGTCAATTAGTGACTCAAACGAGAACTTGCACTGTACATTTGCG
TCAAGATATGTACAAGAATCTTTGCCTAAGTTCAAGATCCCAGGCAGGTCCATGCCTAAG
GAAGCCGCTTTTCAGATTGTTAACGATGAGCTTATGTTGGACGGTAATCCCAGGTTGAAT
TTAGCCTCCTTTGTTAGCACGTGGATGGAGCCCGAGTGCGACAAGCTTATCATGTCTTCC
ATTAATAAGAACTACGTTGACATGGATGAGTACCCTGTTACTACTGAACTTCAGAATCGG
TGTGTTAACATGTTAGCACATCTTTTCCATGCTCCAGTTGGTGACGATGAAACCGCAATA
GGAGTTGGTACAGTGGGTTCATCAGAGGCAATCATGCTTGCTGGCCTTGCTTTCAAACGC
AAATGGCAGGCTAGAAGAAAAGCAGAAGGCAAACCTTTCGATAAGCCTAATATAGTGACT
GGAGCTAATGTACAGGTCTGCTGGGAAAAATTTGCAAGGTACTTTGAGGTTGAATTGAAG
GAGGTAAAATTAAAAGAAGGATACTATGTAATGGACCCTGCTAAAGCAGTAGAGTTGGTA
GATGAGAATACAATATGTGTTGCTGCAATTCTTGGTTCCACTCTGACTGGGGAATTTGAG
GATGTAAAGCTCCTTAACGAGTTGCTTGTAAAAAAGAACAAGGAAACTGGATGGGATACG
CCGATCCATGTTGATGCTGCCAGTGGAGGATTTATTGCTCCTTTCTTGTGGCCAGATCTT
GAATGGGATTTCCGCTTGCCTTTGGTGAAAAGTATAAACGTCAGTGGTCACAAGTATGGA
CTTGTATATGCTGGTGTTGGGTGGGTAATATGGCGGAGCAAGGAAGATTTGCCCGAGGAG
CTTGTGTTTCATATAAATTACCTCGGATCTGATCAGCCTACTTTTACTCTCAACTTCTCT
AAAGGTTCCTATCAAATAATTGCCCAGTATTATCAGTTAATAAGGCTTGGCTTTCAGGGT
TATAAGAGCATCATGGAGAATTGCATGGCAAATGCAAAAGTACTAACGGAGGGAATCACA
AAAATGGGCCGGTTTGATATCGTCTCTAAGGATGTAGGCGTGCCTGTAGTAGCATTTTCT
CTGAGGGATAGCAGCAAATATACAGTGTTTGAAGTGTCTGAGCATCTTAGAAGATTCGGA
TGGATTGTCCCAGCATACACCATGCCACCAGACGCTGAACACATTGCTGTTCTGCGTGTT
GTGGTTAGAGAGGATTTCAGCCACAGCTTAGCTGAGAGACTAGTATCCGACATTGAGAAT
GTTCTGAAAGAGTTAGATACACATCCACCTCCCTTACCCACAAAGGCTGCCCGTGTCACT
GCAGAGGAAGTGCATAATGATAAGGGTGATGGGCTTCATCAGTTTCACACAGATATTGTA
GAGACTCAGAAAGACATACTCAAGCATTGGAGGAAAATAGCAGGGAAGAAGACCAGCGGG
GTCTGTTAA

Peptide Sequence

PEP ID

XP_016476249.1
PEP Infomation

PREDICTED: glutamate decarboxylase [Nicotiana tabacum]
Sequence

MVVTTTSISDSNENLHCTFASRYVQESLPKFKIPGRSMPKEAAFQIVNDELMLDGNPRLN
LASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAI
GVGTVGSSEAIMLAGLAFKRKWQARRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELK
EVKLKEGYYVMDPAKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLVKKNKETGWDT
PIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEE
LVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFQGYKSIMENCMANAKVLTEGIT
KMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRV
VVREDFSHSLAERLVSDIENVLKELDTHPPPLPTKAARVTAEEVHNDKGDGLHQFHTDIV
ETQKDILKHWRKIAGKKTSGVC

Transcript Sequence

Gene sequence data has not been registered.